BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D08LP1|AL428898
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1229 1745 0.0
>3x_Contig1229
Length = 4630
Score = 1745 bits (879), Expect = 0.0
Identities = 911/919 (99%), Gaps = 3/919 (0%)
Strand = Plus / Plus
Query: 1 aactatgccatctttgttaggtttgtctttccataggaagaagactcattcttcgtcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 aactatgccatctttgttaggtttgtctttccataggaagaagactcattcttcgtcaca 888
Query: 61 gttgagtttggcatccggagcgactgcgggagaagnagcgaggacacggacgttcgtctc 120
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 889 gttgagtttggcatccggagcgactgcgg-agaag-agcgaggacacggacgttcgtctc 946
Query: 121 cttcttccggatcaccaaatagtcatcatcacaacaataatagcaataatagtagcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 cttcttccggatcaccaaatagtcatcatcacaacaataatagcaataatagtagcaata 1006
Query: 181 aaccacatcatactgagtcatttacgcattcggtggcagcttttctggaaccgggtcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 aaccacatcatactgagtcatttacgcattcggtggcagcttttctggaaccgggtcata 1066
Query: 241 atttcactccttcttccggtcatagcgatcgtcgtggtacaacggtaacagcagtgaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 atttcactccttcttccggtcatagcgatcgtcgtggtacaacggtaacagcagtgaccg 1126
Query: 301 ctgctggtcccgtacaatctgtttccgccagcacgcagcagcttctgcatgataacggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 ctgctggtcccgtacaatctgtttccgccagcacgcagcagcttctgcatgataacggta 1186
Query: 361 gcagtaacaaccacagtcataatgccaacgggtcatgtgcgaatccgcatcaacagtctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 gcagtaacaaccacagtcataatgccaacgggtcatgtgcgaatccgcatcaacagtctc 1246
Query: 421 aacagcataaacttactagatttttcagacctggtatgaaaaagaggccgtcaggaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 aacagcataaacttactagatttttcagacctggtatgaaaaagaggccgtcaggaggca 1306
Query: 481 gtcttatgtccagcacgaaacttacagatttgatctcaccagatcaaacgaataacctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 gtcttatgtccagcacgaaacttacagatttgatctcaccagatcaaacgaataacctag 1366
Query: 541 atcataacagccatgccttcagtgctataccaccaagtacggattctaccctttcacttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 atcataacagccatgccttcagtgctataccaccaagtacggattctaccctttcacttt 1426
Query: 601 ccaataagactaacatttaccatgatgattcgatattagctcaaaaatacgggaaacttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1427 ccaataagactaacatttaccatgatgattcgatattagctcaaaaatacgggaaacttg 1486
Query: 661 gtaaagtgttgggttccggtgcgggtggttctgtcaaagttcttgttagaccttctgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 gtaaagtgttgggttccggtgcgggtggttctgtcaaagttcttgttagaccttctgatg 1546
Query: 721 gtgccatgttcgctgtgaamagttyccgttcaaggaagcccaatgaacctattagggact 780
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 1547 gtgccatgttcgctgtgaaacagttccgttcaaggaagcccaatgaacctattagggact 1606
Query: 781 acgcaagaaaatgtacctcagaattctgtgttggttccatgttacatcaccctaatatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1607 acgcaagaaaatgtacctcagaattctgtgttggttccatgttacatcaccctaatatca 1666
Query: 841 ttgaaactttggatattttctctgatgc-aaacaaactcaatactaccaagtcatggagt 899
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1667 ttgaaactttggatattttctctgatgcaaaacaaactcaatactaccaagtcatggagt 1726
Query: 900 attgtcccgtagacttctt 918
|||||||||||||||||||
Sbjct: 1727 attgtcccgtagacttctt 1745
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5375
Number of Sequences: 1807
Number of extensions: 5375
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)